BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D02SP1|AL428366
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig877 1164 0.0
>3x_Contig877
Length = 2681
Score = 1164 bits (587), Expect = 0.0
Identities = 611/619 (98%)
Strand = Plus / Plus
Query: 1 atacgagaaattgaaacaattcatcttcgaggaagagaacaagagtggaaatgattgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 atacgagaaattgaaacaattcatcttcgaggaagagaacaagagtggaaatgattgaga 2113
Query: 61 actcagaaatttctgaaatataatatactacatatatgcataccgtacccttatgtatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 actcagaaatttctgaaatataatatactacatatatgcataccgtacccttatgtatat 2173
Query: 121 ttaagattattagttaccatcaagagggaacgagtactggtcagtgccctgtcattggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 ttaagattattagttaccatcaagagggaacgagtactggtcagtgccctgtcattggtg 2233
Query: 181 tcgtgttaactgacacctgtttactttgccattaccctattgtacaaatttcccacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 tcgtgttaactgacacctgtttactttgccattaccctattgtacaaatttcccacacaa 2293
Query: 241 gtaatgagcaaatatcgaaataaaggaatagtagaaataaagtttccaaccgataaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2294 gtaatgagcaaatatcgaaataaaggaatagtagaaataaagtttccaaccgataaagag 2353
Query: 301 attcattaaataaagcaaggcagcaaactatctggagttgatcaaggcgtctatagtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2354 attcattaaataaagcaaggcagcaaactatctggagttgatcaaggcgtctatagtctt 2413
Query: 361 cgatacaactaactaacaggccgaaatcaagagaagaccgtgctcgtacttacagagata 420
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2414 ccatacaactaactaacaggccgaaatcaagagaagaccgtgctcgtacttacagacata 2473
Query: 421 tacacccaacaacagcaaaagaaaacaatcatgtcgtaccttccatcaagtttcgactcc 480
|||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||
Sbjct: 2474 tacacccaacaacagcaaaacacaaccatcatgtcgtaccttccatcaagtttcgactcc 2533
Query: 481 gatgcagatgatttggatgagatgccatttctggataaaatgatttaccattgtaagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2534 gatgcagatgatttggatgagatgccatttctggataaaatgatttaccattgtaagcaa 2593
Query: 541 cagccattagttcctcttgggactctagctaccactggtgcagttttgttggctgtgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 cagccattagttcctcttgggactctagctaccactggtgcagttttgttggctgtgctt 2653
Query: 601 aatgtgaagaacggtaaca 619
|| ||||||| ||||||||
Sbjct: 2654 aacgtgaagaccggtaaca 2672
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7199
Number of Sequences: 1807
Number of extensions: 7199
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)